Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1aP25118 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1aP25118 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Gm13146-201ENSMUST00000118508 780 ntBASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Tnfrsf1aP25118 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfrsf1aP25118 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Gm10493-201ENSMUST00000097270 612 ntBASIC15.27■□□□□ 0.04
Tnfrsf1aP25118 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfrsf1aP25118 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms