Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc4a4O88343 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.56■■□□□ 1.04
Slc4a4O88343 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Slc4a4O88343 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc4a4O88343 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc4a4O88343 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc4a4O88343 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Slc4a4O88343 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Slc4a4O88343 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Slc4a4O88343 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.54■■□□□ 1.04
Slc4a4O88343 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Zfp783-201ENSMUST00000095946 670 ntBASIC21.54■■□□□ 1.04
Slc4a4O88343 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Slc4a4O88343 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Slc4a4O88343 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Gm5643-201ENSMUST00000117081 966 ntBASIC21.53■■□□□ 1.04
Slc4a4O88343 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Slc4a4O88343 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.53■■□□□ 1.04
Slc4a4O88343 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Slc4a4O88343 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Slc4a4O88343 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.53■■□□□ 1.04
Slc4a4O88343 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.52■■□□□ 1.04
Slc4a4O88343 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.52■■□□□ 1.04
Slc4a4O88343 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.52■■□□□ 1.04
Slc4a4O88343 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.52■■□□□ 1.04
Slc4a4O88343 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Slc4a4O88343 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Mtag2-201ENSMUST00000058665 714 ntBASIC21.51■■□□□ 1.03
Slc4a4O88343 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.51■■□□□ 1.03
Slc4a4O88343 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Slc4a4O88343 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Slc4a4O88343 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.5■■□□□ 1.03
Slc4a4O88343 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.5■■□□□ 1.03
Slc4a4O88343 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Slc4a4O88343 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Gm13158-201ENSMUST00000122007 736 ntBASIC21.49■■□□□ 1.03
Slc4a4O88343 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Slc4a4O88343 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Slc4a4O88343 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Slc4a4O88343 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.49■■□□□ 1.03
Slc4a4O88343 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Slc4a4O88343 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.48■■□□□ 1.03
Slc4a4O88343 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms