Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Hdac1O09106 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.77■■□□□ 1.08
Hdac1O09106 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hdac1O09106 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hdac1O09106 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hdac1O09106 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hdac1O09106 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.75■■□□□ 1.07
Hdac1O09106 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Hdac1O09106 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.75■■□□□ 1.07
Hdac1O09106 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.75■■□□□ 1.07
Hdac1O09106 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Hdac1O09106 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.75■■□□□ 1.07
Hdac1O09106 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Hdac1O09106 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hdac1O09106 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Hdac1O09106 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hdac1O09106 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Hdac1O09106 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.74■■□□□ 1.07
Hdac1O09106 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hdac1O09106 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac1O09106 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.73■■□□□ 1.07
Hdac1O09106 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.73■■□□□ 1.07
Hdac1O09106 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Hdac1O09106 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac1O09106 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac1O09106 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac1O09106 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Hdac1O09106 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Hdac1O09106 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hdac1O09106 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.72■■□□□ 1.07
Hdac1O09106 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.72■■□□□ 1.07
Hdac1O09106 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Hdac1O09106 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hdac1O09106 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Hdac1O09106 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hdac1O09106 Reep4-203ENSMUST00000226563 1444 ntBASIC21.71■■□□□ 1.07
Hdac1O09106 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Hdac1O09106 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms