Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.37□□□□□ -0.75
Herc1E9PZP8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Gm10060-201ENSMUST00000212002 111 ntBASIC10.37□□□□□ -0.75
Herc1E9PZP8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.37□□□□□ -0.75
Herc1E9PZP8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Gm10566-201ENSMUST00000086739 996 ntBASIC10.37□□□□□ -0.75
Herc1E9PZP8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Gm16061-201ENSMUST00000122167 857 ntBASIC10.37□□□□□ -0.75
Herc1E9PZP8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Herc1E9PZP8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Gm27000-201ENSMUST00000182943 842 ntBASIC10.36□□□□□ -0.75
Herc1E9PZP8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Rps4l-201ENSMUST00000071745 943 ntBASIC10.36□□□□□ -0.75
Herc1E9PZP8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Herc1E9PZP8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Gm14127-201ENSMUST00000117906 678 ntBASIC10.35□□□□□ -0.75
Herc1E9PZP8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.35□□□□□ -0.75
Herc1E9PZP8 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.35□□□□□ -0.75
Herc1E9PZP8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Herc1E9PZP8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Gm26308-201ENSMUST00000157768 69 ntBASIC10.34□□□□□ -0.75
Herc1E9PZP8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Gm14494-201ENSMUST00000118786 435 ntBASIC10.34□□□□□ -0.75
Herc1E9PZP8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Gm15920-201ENSMUST00000118998 402 ntBASIC10.34□□□□□ -0.75
Herc1E9PZP8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Herc1E9PZP8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.75
Herc1E9PZP8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.33□□□□□ -0.76
Herc1E9PZP8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC10.33□□□□□ -0.76
Herc1E9PZP8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Herc1E9PZP8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms