Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smco4Q9JIS3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smco4Q9JIS3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gm8969-201ENSMUST00000199694 526 ntBASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smco4Q9JIS3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Haglr-201ENSMUST00000100000 2085 ntBASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smco4Q9JIS3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.77□□□□□ -0.04
Smco4Q9JIS3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smco4Q9JIS3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smco4Q9JIS3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms