Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf138Q9CQE0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf138Q9CQE0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.16■□□□□ 0.34
Rnf138Q9CQE0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf138Q9CQE0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf138Q9CQE0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.16■□□□□ 0.34
Rnf138Q9CQE0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf138Q9CQE0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Gm18025-201ENSMUST00000221733 862 ntBASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf138Q9CQE0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf138Q9CQE0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf138Q9CQE0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Mir1199-201ENSMUST00000117015 119 ntBASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf138Q9CQE0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rnf138Q9CQE0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Tgds-204ENSMUST00000228543 1594 ntBASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf138Q9CQE0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.11■□□□□ 0.33
Rnf138Q9CQE0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms