Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ddx41Q91VN6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx41Q91VN6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx41Q91VN6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ddx41Q91VN6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ddx41Q91VN6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ddx41Q91VN6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx41Q91VN6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Gm13168-201ENSMUST00000121771 632 ntBASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx41Q91VN6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx41Q91VN6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx41Q91VN6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Trmt13-210ENSMUST00000198454 880 ntBASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx41Q91VN6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms