Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smg8Q8VE18 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.55■□□□□ 0.72
Smg8Q8VE18 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.55■□□□□ 0.72
Smg8Q8VE18 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.55■□□□□ 0.72
Smg8Q8VE18 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg8Q8VE18 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Gm38285-201ENSMUST00000192928 922 ntBASIC19.54■□□□□ 0.72
Smg8Q8VE18 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg8Q8VE18 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smg8Q8VE18 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.53■□□□□ 0.72
Smg8Q8VE18 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.53■□□□□ 0.72
Smg8Q8VE18 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.53■□□□□ 0.72
Smg8Q8VE18 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Gm715-201ENSMUST00000117865 831 ntBASIC19.52■□□□□ 0.72
Smg8Q8VE18 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Smg8Q8VE18 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smg8Q8VE18 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Smg8Q8VE18 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Smg8Q8VE18 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Mir1199-201ENSMUST00000117015 119 ntBASIC19.51■□□□□ 0.71
Smg8Q8VE18 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smg8Q8VE18 BC021767-201ENSMUST00000126387 1716 ntBASIC19.51■□□□□ 0.71
Smg8Q8VE18 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.51■□□□□ 0.71
Smg8Q8VE18 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms