Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Uspl1Q3ULM6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Tgds-204ENSMUST00000228543 1594 ntBASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Gm2399-201ENSMUST00000104944 225 ntBASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Gm12527-201ENSMUST00000117967 564 ntBASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Uspl1Q3ULM6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Uspl1Q3ULM6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Gm20049-201ENSMUST00000219950 730 ntBASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Dio3-201ENSMUST00000097228 1449 ntBASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Uspl1Q3ULM6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Uspl1Q3ULM6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Uspl1Q3ULM6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Zfp783-201ENSMUST00000095946 670 ntBASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Gm5953-201ENSMUST00000220644 2616 ntBASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Uspl1Q3ULM6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Gm38285-201ENSMUST00000192928 922 ntBASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Uspl1Q3ULM6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Uspl1Q3ULM6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Uspl1Q3ULM6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms