Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.89■□□□□ 0.29
Col10a1Q05306 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col10a1Q05306 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col10a1Q05306 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.88■□□□□ 0.29
Col10a1Q05306 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col10a1Q05306 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col10a1Q05306 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col10a1Q05306 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col10a1Q05306 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.87■□□□□ 0.29
Col10a1Q05306 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col10a1Q05306 Gm29257-201ENSMUST00000186115 639 ntBASIC16.87■□□□□ 0.29
Col10a1Q05306 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col10a1Q05306 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col10a1Q05306 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col10a1Q05306 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col10a1Q05306 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.85■□□□□ 0.29
Col10a1Q05306 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col10a1Q05306 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col10a1Q05306 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.84■□□□□ 0.29
Col10a1Q05306 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col10a1Q05306 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col10a1Q05306 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col10a1Q05306 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.84■□□□□ 0.29
Col10a1Q05306 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col10a1Q05306 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Col10a1Q05306 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Col10a1Q05306 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col10a1Q05306 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.83■□□□□ 0.28
Col10a1Q05306 Gm5408-201ENSMUST00000197998 747 ntBASIC16.83■□□□□ 0.28
Col10a1Q05306 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col10a1Q05306 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col10a1Q05306 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.82■□□□□ 0.28
Col10a1Q05306 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.82■□□□□ 0.28
Col10a1Q05306 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms