Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tpm3P21107 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tpm3P21107 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tpm3P21107 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tpm3P21107 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Tpm3P21107 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tpm3P21107 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.56■□□□□ 0.88
Tpm3P21107 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Tpm3P21107 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Tpm3P21107 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Tpm3P21107 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tpm3P21107 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.55■□□□□ 0.88
Tpm3P21107 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tpm3P21107 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.55■□□□□ 0.88
Tpm3P21107 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Tpm3P21107 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tpm3P21107 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tpm3P21107 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tpm3P21107 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tpm3P21107 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.53■□□□□ 0.88
Tpm3P21107 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.53■□□□□ 0.88
Tpm3P21107 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tpm3P21107 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.53■□□□□ 0.88
Tpm3P21107 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tpm3P21107 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Tpm3P21107 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.52■□□□□ 0.88
Tpm3P21107 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Tpm3P21107 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Tpm3P21107 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.52■□□□□ 0.88
Tpm3P21107 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Tpm3P21107 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tpm3P21107 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.52■□□□□ 0.87
Tpm3P21107 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tpm3P21107 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tpm3P21107 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tpm3P21107 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Tpm3P21107 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tpm3P21107 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm3P21107 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm3P21107 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Tpm3P21107 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tpm3P21107 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms