Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Herc1E9PZP8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Herc1E9PZP8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.41□□□□□ -0.74
Herc1E9PZP8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Gm13474-201ENSMUST00000122466 815 ntBASIC10.41□□□□□ -0.74
Herc1E9PZP8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.41□□□□□ -0.74
Herc1E9PZP8 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.41□□□□□ -0.74
Herc1E9PZP8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Herc1E9PZP8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Herc1E9PZP8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.4□□□□□ -0.75
Herc1E9PZP8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Gm11779-201ENSMUST00000118541 368 ntBASIC10.39□□□□□ -0.75
Herc1E9PZP8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Mir5131-201ENSMUST00000175426 93 ntBASIC10.39□□□□□ -0.75
Herc1E9PZP8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC10.39□□□□□ -0.75
Herc1E9PZP8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Herc1E9PZP8 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.39□□□□□ -0.75
Herc1E9PZP8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm43767-201ENSMUST00000198933 381 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm4995-201ENSMUST00000117247 432 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm15467-201ENSMUST00000120582 445 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 AA386476-201ENSMUST00000098781 1665 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Herc1E9PZP8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.38□□□□□ -0.75
Herc1E9PZP8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms