Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Fst-202ENSMUST00000223640 2612 ntBASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn5Q9JL35 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn5Q9JL35 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn5Q9JL35 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn5Q9JL35 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.65■□□□□ 0.9
Hmgn5Q9JL35 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn5Q9JL35 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn5Q9JL35 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.64■□□□□ 0.89
Hmgn5Q9JL35 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn5Q9JL35 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn5Q9JL35 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn5Q9JL35 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn5Q9JL35 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hmgn5Q9JL35 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn5Q9JL35 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn5Q9JL35 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn5Q9JL35 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn5Q9JL35 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms