Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.31■□□□□ 0.68
Scube3Q66PY1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scube3Q66PY1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.29■□□□□ 0.68
Scube3Q66PY1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.29■□□□□ 0.68
Scube3Q66PY1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scube3Q66PY1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scube3Q66PY1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scube3Q66PY1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scube3Q66PY1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scube3Q66PY1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm22325-201ENSMUST00000158904 308 ntBASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm44549-201ENSMUST00000208351 577 ntBASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.25■□□□□ 0.67
Scube3Q66PY1 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.25■□□□□ 0.67
Scube3Q66PY1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.25■□□□□ 0.67
Scube3Q66PY1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scube3Q66PY1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Scube3Q66PY1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms