Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Znf235Q61116 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.34■□□□□ 0.69
Znf235Q61116 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Znf235Q61116 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Znf235Q61116 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Znf235Q61116 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.33■□□□□ 0.69
Znf235Q61116 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Znf235Q61116 Gm15378-201ENSMUST00000121894 207 ntBASIC19.33■□□□□ 0.68
Znf235Q61116 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Znf235Q61116 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Znf235Q61116 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Znf235Q61116 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Znf235Q61116 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Znf235Q61116 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.32■□□□□ 0.68
Znf235Q61116 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.32■□□□□ 0.68
Znf235Q61116 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Znf235Q61116 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Znf235Q61116 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Znf235Q61116 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Znf235Q61116 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.31■□□□□ 0.68
Znf235Q61116 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf235Q61116 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.3■□□□□ 0.68
Znf235Q61116 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Znf235Q61116 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Znf235Q61116 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Znf235Q61116 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Znf235Q61116 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf235Q61116 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Znf235Q61116 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf235Q61116 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Znf235Q61116 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.29■□□□□ 0.68
Znf235Q61116 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf235Q61116 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf235Q61116 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Znf235Q61116 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf235Q61116 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.28■□□□□ 0.68
Znf235Q61116 Gm10138-203ENSMUST00000206952 366 ntBASIC19.28■□□□□ 0.68
Znf235Q61116 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf235Q61116 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf235Q61116 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Znf235Q61116 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.27■□□□□ 0.68
Znf235Q61116 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf235Q61116 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.27■□□□□ 0.68
Znf235Q61116 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Znf235Q61116 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.27■□□□□ 0.67
Znf235Q61116 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Znf235Q61116 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.26■□□□□ 0.67
Znf235Q61116 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.26■□□□□ 0.67
Znf235Q61116 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Znf235Q61116 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.26■□□□□ 0.67
Znf235Q61116 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf235Q61116 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Znf235Q61116 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.26■□□□□ 0.67
Znf235Q61116 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Znf235Q61116 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf235Q61116 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf235Q61116 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.26■□□□□ 0.67
Znf235Q61116 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf235Q61116 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.25■□□□□ 0.67
Znf235Q61116 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.25■□□□□ 0.67
Znf235Q61116 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.25■□□□□ 0.67
Znf235Q61116 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Znf235Q61116 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf235Q61116 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms