Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shroom1Q5SX79 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shroom1Q5SX79 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom1Q5SX79 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom1Q5SX79 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Shroom1Q5SX79 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.52■□□□□ 0.72
Shroom1Q5SX79 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Shroom1Q5SX79 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shroom1Q5SX79 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom1Q5SX79 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Shroom1Q5SX79 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Gm18666-201ENSMUST00000190039 958 ntBASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shroom1Q5SX79 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gm11249-201ENSMUST00000117071 859 ntBASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 BC021767-201ENSMUST00000126387 1716 ntBASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shroom1Q5SX79 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shroom1Q5SX79 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shroom1Q5SX79 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms