Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Dio3-201ENSMUST00000097228 1449 ntBASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx6-3Q3UHX8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx6-3Q3UHX8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx6-3Q3UHX8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Nkx6-3Q3UHX8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nkx6-3Q3UHX8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx6-3Q3UHX8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx6-3Q3UHX8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx6-3Q3UHX8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx6-3Q3UHX8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms