Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Col10a1Q05306 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.95■□□□□ 0.3
Col10a1Q05306 Gm12933-201ENSMUST00000120203 872 ntBASIC16.95■□□□□ 0.3
Col10a1Q05306 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.95■□□□□ 0.3
Col10a1Q05306 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.95■□□□□ 0.3
Col10a1Q05306 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col10a1Q05306 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col10a1Q05306 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col10a1Q05306 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Col10a1Q05306 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col10a1Q05306 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.94■□□□□ 0.3
Col10a1Q05306 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Gm6211-202ENSMUST00000167849 925 ntBASIC16.94■□□□□ 0.3
Col10a1Q05306 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col10a1Q05306 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Col10a1Q05306 Gm10602-201ENSMUST00000098239 609 ntBASIC16.94■□□□□ 0.3
Col10a1Q05306 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col10a1Q05306 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.93■□□□□ 0.3
Col10a1Q05306 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Col10a1Q05306 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.93■□□□□ 0.3
Col10a1Q05306 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.93■□□□□ 0.3
Col10a1Q05306 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col10a1Q05306 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.93■□□□□ 0.3
Col10a1Q05306 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Col10a1Q05306 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Gm13148-201ENSMUST00000118892 745 ntBASIC16.92■□□□□ 0.3
Col10a1Q05306 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Col10a1Q05306 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.92■□□□□ 0.3
Col10a1Q05306 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.92■□□□□ 0.3
Col10a1Q05306 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Col10a1Q05306 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col10a1Q05306 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col10a1Q05306 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col10a1Q05306 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.91■□□□□ 0.3
Col10a1Q05306 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.91■□□□□ 0.3
Col10a1Q05306 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.91■□□□□ 0.3
Col10a1Q05306 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col10a1Q05306 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col10a1Q05306 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col10a1Q05306 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col10a1Q05306 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col10a1Q05306 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col10a1Q05306 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col10a1Q05306 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col10a1Q05306 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.9■□□□□ 0.3
Col10a1Q05306 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Col10a1Q05306 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col10a1Q05306 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col10a1Q05306 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.9■□□□□ 0.3
Col10a1Q05306 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col10a1Q05306 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col10a1Q05306 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col10a1Q05306 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col10a1Q05306 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col10a1Q05306 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.89■□□□□ 0.29
Col10a1Q05306 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms