Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5493S4R2D1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Gm5493S4R2D1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5493S4R2D1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5493S4R2D1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm5493S4R2D1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5493S4R2D1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm5493S4R2D1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm5493S4R2D1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gm5493S4R2D1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gm5493S4R2D1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5493S4R2D1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5493S4R2D1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm5493S4R2D1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm5493S4R2D1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.71■□□□□ 0.91
Gm5493S4R2D1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.71■□□□□ 0.91
Gm5493S4R2D1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5493S4R2D1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5493S4R2D1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5493S4R2D1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5493S4R2D1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5493S4R2D1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5493S4R2D1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5493S4R2D1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5493S4R2D1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm5493S4R2D1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm5493S4R2D1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm5493S4R2D1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5493S4R2D1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5493S4R2D1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5493S4R2D1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5493S4R2D1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5493S4R2D1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5493S4R2D1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.65■□□□□ 0.9
Gm5493S4R2D1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5493S4R2D1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5493S4R2D1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5493S4R2D1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5493S4R2D1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5493S4R2D1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5493S4R2D1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm5493S4R2D1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5493S4R2D1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5493S4R2D1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5493S4R2D1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5493S4R2D1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Gm5493S4R2D1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5493S4R2D1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5493S4R2D1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5493S4R2D1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5493S4R2D1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gm5493S4R2D1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm5493S4R2D1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5493S4R2D1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm5493S4R2D1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5493S4R2D1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5493S4R2D1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5493S4R2D1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5493S4R2D1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Gm5493S4R2D1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5493S4R2D1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm5493S4R2D1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm5493S4R2D1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5493S4R2D1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5493S4R2D1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm5493S4R2D1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5493S4R2D1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5493S4R2D1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Gm5493S4R2D1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5493S4R2D1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5493S4R2D1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm5493S4R2D1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5493S4R2D1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5493S4R2D1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5493S4R2D1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5493S4R2D1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5493S4R2D1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm5493S4R2D1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm5493S4R2D1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm5493S4R2D1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm5493S4R2D1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Gm5493S4R2D1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Gm5493S4R2D1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm5493S4R2D1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gm5493S4R2D1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5493S4R2D1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5493S4R2D1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5493S4R2D1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5493S4R2D1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gm5493S4R2D1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm5493S4R2D1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm5493S4R2D1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm5493S4R2D1 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.42■□□□□ 0.86
Gm5493S4R2D1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms