Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cldnd2Q9D9H2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cldnd2Q9D9H2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.21■□□□□ 0.99
Cldnd2Q9D9H2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd2Q9D9H2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd2Q9D9H2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cldnd2Q9D9H2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Cldnd2Q9D9H2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cldnd2Q9D9H2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd2Q9D9H2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd2Q9D9H2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd2Q9D9H2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldnd2Q9D9H2 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.16■□□□□ 0.98
Cldnd2Q9D9H2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cldnd2Q9D9H2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldnd2Q9D9H2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.13■□□□□ 0.97
Cldnd2Q9D9H2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldnd2Q9D9H2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cldnd2Q9D9H2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldnd2Q9D9H2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cldnd2Q9D9H2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldnd2Q9D9H2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldnd2Q9D9H2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldnd2Q9D9H2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cldnd2Q9D9H2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cldnd2Q9D9H2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldnd2Q9D9H2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cldnd2Q9D9H2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
Cldnd2Q9D9H2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cldnd2Q9D9H2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldnd2Q9D9H2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cldnd2Q9D9H2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldnd2Q9D9H2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldnd2Q9D9H2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldnd2Q9D9H2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cldnd2Q9D9H2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldnd2Q9D9H2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cldnd2Q9D9H2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cldnd2Q9D9H2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cldnd2Q9D9H2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldnd2Q9D9H2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldnd2Q9D9H2 Gm26115-201ENSMUST00000175605 87 ntBASIC21.04■□□□□ 0.96
Cldnd2Q9D9H2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldnd2Q9D9H2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Cldnd2Q9D9H2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.03■□□□□ 0.96
Cldnd2Q9D9H2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldnd2Q9D9H2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd2Q9D9H2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd2Q9D9H2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldnd2Q9D9H2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldnd2Q9D9H2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Cldnd2Q9D9H2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldnd2Q9D9H2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldnd2Q9D9H2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd2Q9D9H2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd2Q9D9H2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.99■□□□□ 0.95
Cldnd2Q9D9H2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldnd2Q9D9H2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd2Q9D9H2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd2Q9D9H2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd2Q9D9H2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd2Q9D9H2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldnd2Q9D9H2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldnd2Q9D9H2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd2Q9D9H2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd2Q9D9H2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldnd2Q9D9H2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd2Q9D9H2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd2Q9D9H2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldnd2Q9D9H2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cldnd2Q9D9H2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldnd2Q9D9H2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd2Q9D9H2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd2Q9D9H2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldnd2Q9D9H2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd2Q9D9H2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldnd2Q9D9H2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.91■□□□□ 0.94
Cldnd2Q9D9H2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.91■□□□□ 0.94
Cldnd2Q9D9H2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldnd2Q9D9H2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cldnd2Q9D9H2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd2Q9D9H2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cldnd2Q9D9H2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldnd2Q9D9H2 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.89■□□□□ 0.94
Cldnd2Q9D9H2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd2Q9D9H2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldnd2Q9D9H2 Gm8109-201ENSMUST00000194076 746 ntBASIC20.88■□□□□ 0.93
Cldnd2Q9D9H2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldnd2Q9D9H2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cldnd2Q9D9H2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.86■□□□□ 0.93
Cldnd2Q9D9H2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Cldnd2Q9D9H2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldnd2Q9D9H2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldnd2Q9D9H2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldnd2Q9D9H2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cldnd2Q9D9H2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.85■□□□□ 0.93
Cldnd2Q9D9H2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd2Q9D9H2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldnd2Q9D9H2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Cldnd2Q9D9H2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms