Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ssbp1Q9CYR0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp1Q9CYR0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ssbp1Q9CYR0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ssbp1Q9CYR0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ssbp1Q9CYR0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ssbp1Q9CYR0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp1Q9CYR0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ssbp1Q9CYR0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssbp1Q9CYR0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ssbp1Q9CYR0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ssbp1Q9CYR0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
Ssbp1Q9CYR0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.02■□□□□ 0.47
Ssbp1Q9CYR0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ssbp1Q9CYR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ssbp1Q9CYR0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ssbp1Q9CYR0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ssbp1Q9CYR0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp1Q9CYR0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp1Q9CYR0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ssbp1Q9CYR0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Ssbp1Q9CYR0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ssbp1Q9CYR0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssbp1Q9CYR0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssbp1Q9CYR0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.96■□□□□ 0.47
Ssbp1Q9CYR0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp1Q9CYR0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp1Q9CYR0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssbp1Q9CYR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.95■□□□□ 0.46
Ssbp1Q9CYR0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssbp1Q9CYR0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ssbp1Q9CYR0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp1Q9CYR0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp1Q9CYR0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssbp1Q9CYR0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssbp1Q9CYR0 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.91■□□□□ 0.46
Ssbp1Q9CYR0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.91■□□□□ 0.46
Ssbp1Q9CYR0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ssbp1Q9CYR0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ssbp1Q9CYR0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ssbp1Q9CYR0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssbp1Q9CYR0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssbp1Q9CYR0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssbp1Q9CYR0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssbp1Q9CYR0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ssbp1Q9CYR0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssbp1Q9CYR0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ssbp1Q9CYR0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssbp1Q9CYR0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.85■□□□□ 0.45
Ssbp1Q9CYR0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssbp1Q9CYR0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssbp1Q9CYR0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssbp1Q9CYR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssbp1Q9CYR0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ssbp1Q9CYR0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssbp1Q9CYR0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ssbp1Q9CYR0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssbp1Q9CYR0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssbp1Q9CYR0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ssbp1Q9CYR0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ssbp1Q9CYR0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssbp1Q9CYR0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssbp1Q9CYR0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ssbp1Q9CYR0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ssbp1Q9CYR0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ssbp1Q9CYR0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ssbp1Q9CYR0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ssbp1Q9CYR0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssbp1Q9CYR0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ssbp1Q9CYR0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssbp1Q9CYR0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.77■□□□□ 0.44
Ssbp1Q9CYR0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ssbp1Q9CYR0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssbp1Q9CYR0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssbp1Q9CYR0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.76■□□□□ 0.43
Ssbp1Q9CYR0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ssbp1Q9CYR0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssbp1Q9CYR0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms