Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhgb2Q91XX7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb2Q91XX7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhgb2Q91XX7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.14■■□□□ 1.3
Pcdhgb2Q91XX7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhgb2Q91XX7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhgb2Q91XX7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Pcdhgb2Q91XX7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhgb2Q91XX7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Pcdhgb2Q91XX7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhgb2Q91XX7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhgb2Q91XX7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Pcdhgb2Q91XX7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb2Q91XX7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhgb2Q91XX7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb2Q91XX7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhgb2Q91XX7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.1■■□□□ 1.29
Pcdhgb2Q91XX7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb2Q91XX7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhgb2Q91XX7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb2Q91XX7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhgb2Q91XX7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhgb2Q91XX7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhgb2Q91XX7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb2Q91XX7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhgb2Q91XX7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb2Q91XX7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhgb2Q91XX7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhgb2Q91XX7 Peli2-204ENSMUST00000226513 1320 ntBASIC23.05■■□□□ 1.28
Pcdhgb2Q91XX7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb2Q91XX7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhgb2Q91XX7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Pcdhgb2Q91XX7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb2Q91XX7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhgb2Q91XX7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhgb2Q91XX7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhgb2Q91XX7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhgb2Q91XX7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.01■■□□□ 1.27
Pcdhgb2Q91XX7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.01■■□□□ 1.27
Pcdhgb2Q91XX7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23■■□□□ 1.27
Pcdhgb2Q91XX7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb2Q91XX7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhgb2Q91XX7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb2Q91XX7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhgb2Q91XX7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhgb2Q91XX7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhgb2Q91XX7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhgb2Q91XX7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb2Q91XX7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb2Q91XX7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhgb2Q91XX7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Pcdhgb2Q91XX7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhgb2Q91XX7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhgb2Q91XX7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb2Q91XX7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhgb2Q91XX7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb2Q91XX7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhgb2Q91XX7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb2Q91XX7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhgb2Q91XX7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhgb2Q91XX7 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhgb2Q91XX7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhgb2Q91XX7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb2Q91XX7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb2Q91XX7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb2Q91XX7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb2Q91XX7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb2Q91XX7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcdhgb2Q91XX7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb2Q91XX7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb2Q91XX7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb2Q91XX7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb2Q91XX7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb2Q91XX7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb2Q91XX7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.8■■□□□ 1.24
Pcdhgb2Q91XX7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgb2Q91XX7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgb2Q91XX7 Gm26115-201ENSMUST00000175605 87 ntBASIC22.79■■□□□ 1.24
Pcdhgb2Q91XX7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb2Q91XX7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb2Q91XX7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb2Q91XX7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb2Q91XX7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb2Q91XX7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb2Q91XX7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb2Q91XX7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhgb2Q91XX7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb2Q91XX7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Pcdhgb2Q91XX7 Gm8109-201ENSMUST00000194076 746 ntBASIC22.74■■□□□ 1.23
Pcdhgb2Q91XX7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb2Q91XX7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb2Q91XX7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb2Q91XX7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb2Q91XX7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb2Q91XX7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms