Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H1fooQ8VIK3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.63■□□□□ 0.89
H1fooQ8VIK3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H1fooQ8VIK3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H1fooQ8VIK3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H1fooQ8VIK3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.62■□□□□ 0.89
H1fooQ8VIK3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
H1fooQ8VIK3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H1fooQ8VIK3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H1fooQ8VIK3 Amer2-203ENSMUST00000225247 2662 ntBASIC20.6■□□□□ 0.89
H1fooQ8VIK3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H1fooQ8VIK3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H1fooQ8VIK3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H1fooQ8VIK3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H1fooQ8VIK3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H1fooQ8VIK3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
H1fooQ8VIK3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H1fooQ8VIK3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H1fooQ8VIK3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
H1fooQ8VIK3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H1fooQ8VIK3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H1fooQ8VIK3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
H1fooQ8VIK3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H1fooQ8VIK3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H1fooQ8VIK3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H1fooQ8VIK3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
H1fooQ8VIK3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H1fooQ8VIK3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
H1fooQ8VIK3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
H1fooQ8VIK3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H1fooQ8VIK3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H1fooQ8VIK3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H1fooQ8VIK3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H1fooQ8VIK3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H1fooQ8VIK3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
H1fooQ8VIK3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H1fooQ8VIK3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H1fooQ8VIK3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.5■□□□□ 0.87
H1fooQ8VIK3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
H1fooQ8VIK3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
H1fooQ8VIK3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
H1fooQ8VIK3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H1fooQ8VIK3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.49■□□□□ 0.87
H1fooQ8VIK3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
H1fooQ8VIK3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
H1fooQ8VIK3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H1fooQ8VIK3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.48■□□□□ 0.87
H1fooQ8VIK3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H1fooQ8VIK3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H1fooQ8VIK3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H1fooQ8VIK3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H1fooQ8VIK3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H1fooQ8VIK3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H1fooQ8VIK3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
H1fooQ8VIK3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
H1fooQ8VIK3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H1fooQ8VIK3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.44■□□□□ 0.86
H1fooQ8VIK3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H1fooQ8VIK3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.43■□□□□ 0.86
H1fooQ8VIK3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H1fooQ8VIK3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
H1fooQ8VIK3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
H1fooQ8VIK3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H1fooQ8VIK3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.4■□□□□ 0.86
H1fooQ8VIK3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H1fooQ8VIK3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
H1fooQ8VIK3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H1fooQ8VIK3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fooQ8VIK3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H1fooQ8VIK3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.36■□□□□ 0.85
H1fooQ8VIK3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H1fooQ8VIK3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H1fooQ8VIK3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H1fooQ8VIK3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fooQ8VIK3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fooQ8VIK3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fooQ8VIK3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fooQ8VIK3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H1fooQ8VIK3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
H1fooQ8VIK3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
H1fooQ8VIK3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H1fooQ8VIK3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H1fooQ8VIK3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H1fooQ8VIK3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.31■□□□□ 0.84
H1fooQ8VIK3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H1fooQ8VIK3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.3■□□□□ 0.84
H1fooQ8VIK3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.3■□□□□ 0.84
H1fooQ8VIK3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.3■□□□□ 0.84
H1fooQ8VIK3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H1fooQ8VIK3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H1fooQ8VIK3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H1fooQ8VIK3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H1fooQ8VIK3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H1fooQ8VIK3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H1fooQ8VIK3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms