Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.26■■□□□ 1.15
Rab40bQ8VHP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rab40bQ8VHP8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rab40bQ8VHP8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rab40bQ8VHP8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rab40bQ8VHP8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rab40bQ8VHP8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rab40bQ8VHP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.22■■□□□ 1.15
Rab40bQ8VHP8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.22■■□□□ 1.15
Rab40bQ8VHP8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rab40bQ8VHP8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rab40bQ8VHP8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rab40bQ8VHP8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rab40bQ8VHP8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.2■■□□□ 1.14
Rab40bQ8VHP8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.2■■□□□ 1.14
Rab40bQ8VHP8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rab40bQ8VHP8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rab40bQ8VHP8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rab40bQ8VHP8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.18■■□□□ 1.14
Rab40bQ8VHP8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.18■■□□□ 1.14
Rab40bQ8VHP8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
Rab40bQ8VHP8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab40bQ8VHP8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab40bQ8VHP8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab40bQ8VHP8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rab40bQ8VHP8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rab40bQ8VHP8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.14■■□□□ 1.13
Rab40bQ8VHP8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rab40bQ8VHP8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rab40bQ8VHP8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rab40bQ8VHP8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Rab40bQ8VHP8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rab40bQ8VHP8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Rab40bQ8VHP8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rab40bQ8VHP8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rab40bQ8VHP8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Rab40bQ8VHP8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rab40bQ8VHP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.11■■□□□ 1.13
Rab40bQ8VHP8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.11■■□□□ 1.13
Rab40bQ8VHP8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Rab40bQ8VHP8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Rab40bQ8VHP8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab40bQ8VHP8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rab40bQ8VHP8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rab40bQ8VHP8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rab40bQ8VHP8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rab40bQ8VHP8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rab40bQ8VHP8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rab40bQ8VHP8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rab40bQ8VHP8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rab40bQ8VHP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rab40bQ8VHP8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rab40bQ8VHP8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab40bQ8VHP8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab40bQ8VHP8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab40bQ8VHP8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab40bQ8VHP8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rab40bQ8VHP8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rab40bQ8VHP8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rab40bQ8VHP8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rab40bQ8VHP8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab40bQ8VHP8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab40bQ8VHP8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rab40bQ8VHP8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Rab40bQ8VHP8 Peli2-204ENSMUST00000226513 1320 ntBASIC21.97■■□□□ 1.11
Rab40bQ8VHP8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.97■■□□□ 1.11
Rab40bQ8VHP8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rab40bQ8VHP8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rab40bQ8VHP8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Rab40bQ8VHP8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rab40bQ8VHP8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab40bQ8VHP8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab40bQ8VHP8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rab40bQ8VHP8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab40bQ8VHP8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rab40bQ8VHP8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rab40bQ8VHP8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab40bQ8VHP8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Rab40bQ8VHP8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab40bQ8VHP8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Rab40bQ8VHP8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rab40bQ8VHP8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Rab40bQ8VHP8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab40bQ8VHP8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rab40bQ8VHP8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab40bQ8VHP8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rab40bQ8VHP8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Rab40bQ8VHP8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rab40bQ8VHP8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rab40bQ8VHP8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rab40bQ8VHP8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rab40bQ8VHP8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.85■■□□□ 1.09
Rab40bQ8VHP8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rab40bQ8VHP8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms