Protein–RNA interactions for Protein: Q8C7R2

Gm3411, Predicted gene 3411, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3411Q8C7R2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Gm3411Q8C7R2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3411Q8C7R2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3411Q8C7R2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.45■■□□□ 1.5
Gm3411Q8C7R2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3411Q8C7R2 Amer2-203ENSMUST00000225247 2662 ntBASIC24.44■■□□□ 1.5
Gm3411Q8C7R2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.43■■□□□ 1.5
Gm3411Q8C7R2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm3411Q8C7R2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm3411Q8C7R2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm3411Q8C7R2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Gm3411Q8C7R2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Gm3411Q8C7R2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Gm3411Q8C7R2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Gm3411Q8C7R2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.39■■□□□ 1.49
Gm3411Q8C7R2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm3411Q8C7R2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3411Q8C7R2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3411Q8C7R2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3411Q8C7R2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3411Q8C7R2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3411Q8C7R2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3411Q8C7R2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm3411Q8C7R2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm3411Q8C7R2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.33■■□□□ 1.49
Gm3411Q8C7R2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.32■■□□□ 1.48
Gm3411Q8C7R2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Gm3411Q8C7R2 Gm24970-201ENSMUST00000175582 82 ntBASIC24.3■■□□□ 1.48
Gm3411Q8C7R2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Gm3411Q8C7R2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm3411Q8C7R2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
Gm3411Q8C7R2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Gm3411Q8C7R2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3411Q8C7R2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Gm3411Q8C7R2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3411Q8C7R2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Gm3411Q8C7R2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Gm3411Q8C7R2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3411Q8C7R2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Gm3411Q8C7R2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm3411Q8C7R2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Gm3411Q8C7R2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Gm3411Q8C7R2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.25■■□□□ 1.47
Gm3411Q8C7R2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm3411Q8C7R2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Gm3411Q8C7R2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3411Q8C7R2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Gm3411Q8C7R2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.22■■□□□ 1.47
Gm3411Q8C7R2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Gm3411Q8C7R2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Gm3411Q8C7R2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Gm3411Q8C7R2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3411Q8C7R2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3411Q8C7R2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3411Q8C7R2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Gm3411Q8C7R2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3411Q8C7R2 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.18■■□□□ 1.46
Gm3411Q8C7R2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Gm3411Q8C7R2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Gm3411Q8C7R2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Gm3411Q8C7R2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Gm3411Q8C7R2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Gm3411Q8C7R2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Gm3411Q8C7R2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.14■■□□□ 1.45
Gm3411Q8C7R2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Gm3411Q8C7R2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Gm3411Q8C7R2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Gm3411Q8C7R2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Gm3411Q8C7R2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.11■■□□□ 1.45
Gm3411Q8C7R2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Gm3411Q8C7R2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Gm3411Q8C7R2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.09■■□□□ 1.45
Gm3411Q8C7R2 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.09■■□□□ 1.45
Gm3411Q8C7R2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Gm3411Q8C7R2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3411Q8C7R2 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.07■■□□□ 1.44
Gm3411Q8C7R2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3411Q8C7R2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm3411Q8C7R2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.06■■□□□ 1.44
Gm3411Q8C7R2 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.05■■□□□ 1.44
Gm3411Q8C7R2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
Gm3411Q8C7R2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gm3411Q8C7R2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Gm3411Q8C7R2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
Gm3411Q8C7R2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Gm3411Q8C7R2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Gm3411Q8C7R2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Gm3411Q8C7R2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms