Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm11Q8BUV6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Lsm11Q8BUV6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lsm11Q8BUV6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lsm11Q8BUV6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsm11Q8BUV6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lsm11Q8BUV6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.01■□□□□ 0.95
Lsm11Q8BUV6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm11Q8BUV6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm11Q8BUV6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm11Q8BUV6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lsm11Q8BUV6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Lsm11Q8BUV6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lsm11Q8BUV6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm11Q8BUV6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lsm11Q8BUV6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm11Q8BUV6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lsm11Q8BUV6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.96■□□□□ 0.95
Lsm11Q8BUV6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Lsm11Q8BUV6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Lsm11Q8BUV6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Lsm11Q8BUV6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lsm11Q8BUV6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.95■□□□□ 0.94
Lsm11Q8BUV6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.95■□□□□ 0.94
Lsm11Q8BUV6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm11Q8BUV6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm11Q8BUV6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Lsm11Q8BUV6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lsm11Q8BUV6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lsm11Q8BUV6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.93■□□□□ 0.94
Lsm11Q8BUV6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm11Q8BUV6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm11Q8BUV6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lsm11Q8BUV6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.9■□□□□ 0.94
Lsm11Q8BUV6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm11Q8BUV6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm11Q8BUV6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm11Q8BUV6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lsm11Q8BUV6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lsm11Q8BUV6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm11Q8BUV6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Lsm11Q8BUV6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Lsm11Q8BUV6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm11Q8BUV6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lsm11Q8BUV6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lsm11Q8BUV6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lsm11Q8BUV6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm11Q8BUV6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm11Q8BUV6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm11Q8BUV6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lsm11Q8BUV6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lsm11Q8BUV6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lsm11Q8BUV6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Lsm11Q8BUV6 Peli2-204ENSMUST00000226513 1320 ntBASIC20.81■□□□□ 0.92
Lsm11Q8BUV6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lsm11Q8BUV6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lsm11Q8BUV6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm11Q8BUV6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lsm11Q8BUV6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Lsm11Q8BUV6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lsm11Q8BUV6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lsm11Q8BUV6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lsm11Q8BUV6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Lsm11Q8BUV6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.77■□□□□ 0.92
Lsm11Q8BUV6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lsm11Q8BUV6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Lsm11Q8BUV6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm11Q8BUV6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lsm11Q8BUV6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Lsm11Q8BUV6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lsm11Q8BUV6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm11Q8BUV6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm11Q8BUV6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lsm11Q8BUV6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lsm11Q8BUV6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Lsm11Q8BUV6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Lsm11Q8BUV6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lsm11Q8BUV6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.71■□□□□ 0.91
Lsm11Q8BUV6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm11Q8BUV6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Lsm11Q8BUV6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lsm11Q8BUV6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm11Q8BUV6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm11Q8BUV6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm11Q8BUV6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lsm11Q8BUV6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Lsm11Q8BUV6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm11Q8BUV6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm11Q8BUV6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.67■□□□□ 0.9
Lsm11Q8BUV6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Lsm11Q8BUV6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm11Q8BUV6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm11Q8BUV6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm11Q8BUV6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm11Q8BUV6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm11Q8BUV6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm11Q8BUV6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm11Q8BUV6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm11Q8BUV6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm11Q8BUV6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms