Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
R3hcc1lQ8BJM3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.45■■□□□ 1.51
R3hcc1lQ8BJM3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
R3hcc1lQ8BJM3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
R3hcc1lQ8BJM3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
R3hcc1lQ8BJM3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
R3hcc1lQ8BJM3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
R3hcc1lQ8BJM3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
R3hcc1lQ8BJM3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
R3hcc1lQ8BJM3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
R3hcc1lQ8BJM3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
R3hcc1lQ8BJM3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
R3hcc1lQ8BJM3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.41■■□□□ 1.5
R3hcc1lQ8BJM3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
R3hcc1lQ8BJM3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
R3hcc1lQ8BJM3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.41■■□□□ 1.5
R3hcc1lQ8BJM3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
R3hcc1lQ8BJM3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
R3hcc1lQ8BJM3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
R3hcc1lQ8BJM3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
R3hcc1lQ8BJM3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
R3hcc1lQ8BJM3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
R3hcc1lQ8BJM3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
R3hcc1lQ8BJM3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
R3hcc1lQ8BJM3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.36■■□□□ 1.49
R3hcc1lQ8BJM3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
R3hcc1lQ8BJM3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
R3hcc1lQ8BJM3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
R3hcc1lQ8BJM3 Gm16148-201ENSMUST00000119653 893 ntBASIC24.33■■□□□ 1.49
R3hcc1lQ8BJM3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
R3hcc1lQ8BJM3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.33■■□□□ 1.48
R3hcc1lQ8BJM3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
R3hcc1lQ8BJM3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
R3hcc1lQ8BJM3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
R3hcc1lQ8BJM3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
R3hcc1lQ8BJM3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
R3hcc1lQ8BJM3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
R3hcc1lQ8BJM3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
R3hcc1lQ8BJM3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
R3hcc1lQ8BJM3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
R3hcc1lQ8BJM3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
R3hcc1lQ8BJM3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
R3hcc1lQ8BJM3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
R3hcc1lQ8BJM3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
R3hcc1lQ8BJM3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.22■■□□□ 1.47
R3hcc1lQ8BJM3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
R3hcc1lQ8BJM3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
R3hcc1lQ8BJM3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
R3hcc1lQ8BJM3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
R3hcc1lQ8BJM3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.2■■□□□ 1.46
R3hcc1lQ8BJM3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
R3hcc1lQ8BJM3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
R3hcc1lQ8BJM3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hcc1lQ8BJM3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
R3hcc1lQ8BJM3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
R3hcc1lQ8BJM3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
R3hcc1lQ8BJM3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
R3hcc1lQ8BJM3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.18■■□□□ 1.46
R3hcc1lQ8BJM3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
R3hcc1lQ8BJM3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
R3hcc1lQ8BJM3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
R3hcc1lQ8BJM3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
R3hcc1lQ8BJM3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
R3hcc1lQ8BJM3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
R3hcc1lQ8BJM3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
R3hcc1lQ8BJM3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hcc1lQ8BJM3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
R3hcc1lQ8BJM3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
R3hcc1lQ8BJM3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
R3hcc1lQ8BJM3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
R3hcc1lQ8BJM3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
R3hcc1lQ8BJM3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
R3hcc1lQ8BJM3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
R3hcc1lQ8BJM3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
R3hcc1lQ8BJM3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
R3hcc1lQ8BJM3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hcc1lQ8BJM3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hcc1lQ8BJM3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
R3hcc1lQ8BJM3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
R3hcc1lQ8BJM3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
R3hcc1lQ8BJM3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
R3hcc1lQ8BJM3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.03■■□□□ 1.44
R3hcc1lQ8BJM3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.02■■□□□ 1.44
R3hcc1lQ8BJM3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
R3hcc1lQ8BJM3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
R3hcc1lQ8BJM3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
R3hcc1lQ8BJM3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
R3hcc1lQ8BJM3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
R3hcc1lQ8BJM3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 127 ms