Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nucks1Q80XU3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.42■■□□□ 1.82
Nucks1Q80XU3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Nucks1Q80XU3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
Nucks1Q80XU3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Nucks1Q80XU3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Nucks1Q80XU3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Nucks1Q80XU3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Nucks1Q80XU3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Nucks1Q80XU3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nucks1Q80XU3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nucks1Q80XU3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Nucks1Q80XU3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Nucks1Q80XU3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Nucks1Q80XU3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nucks1Q80XU3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nucks1Q80XU3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nucks1Q80XU3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
Nucks1Q80XU3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Nucks1Q80XU3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.32■■□□□ 1.8
Nucks1Q80XU3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nucks1Q80XU3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.31■■□□□ 1.8
Nucks1Q80XU3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nucks1Q80XU3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nucks1Q80XU3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Nucks1Q80XU3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.3■■□□□ 1.8
Nucks1Q80XU3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nucks1Q80XU3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Nucks1Q80XU3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Nucks1Q80XU3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.29■■□□□ 1.8
Nucks1Q80XU3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nucks1Q80XU3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nucks1Q80XU3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nucks1Q80XU3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nucks1Q80XU3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Nucks1Q80XU3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nucks1Q80XU3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nucks1Q80XU3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nucks1Q80XU3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nucks1Q80XU3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nucks1Q80XU3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Nucks1Q80XU3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Nucks1Q80XU3 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.23■■□□□ 1.79
Nucks1Q80XU3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nucks1Q80XU3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nucks1Q80XU3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nucks1Q80XU3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nucks1Q80XU3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Nucks1Q80XU3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.19■■□□□ 1.78
Nucks1Q80XU3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nucks1Q80XU3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.18■■□□□ 1.78
Nucks1Q80XU3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Nucks1Q80XU3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Nucks1Q80XU3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Nucks1Q80XU3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nucks1Q80XU3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nucks1Q80XU3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nucks1Q80XU3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Nucks1Q80XU3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.15■■□□□ 1.78
Nucks1Q80XU3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Nucks1Q80XU3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Nucks1Q80XU3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.14■■□□□ 1.78
Nucks1Q80XU3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Nucks1Q80XU3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Nucks1Q80XU3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nucks1Q80XU3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Nucks1Q80XU3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nucks1Q80XU3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
Nucks1Q80XU3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Nucks1Q80XU3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nucks1Q80XU3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nucks1Q80XU3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nucks1Q80XU3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nucks1Q80XU3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.11■■□□□ 1.77
Nucks1Q80XU3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Nucks1Q80XU3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nucks1Q80XU3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nucks1Q80XU3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Nucks1Q80XU3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nucks1Q80XU3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Nucks1Q80XU3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nucks1Q80XU3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nucks1Q80XU3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nucks1Q80XU3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nucks1Q80XU3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nucks1Q80XU3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Nucks1Q80XU3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nucks1Q80XU3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nucks1Q80XU3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.03■■□□□ 1.76
Nucks1Q80XU3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.03■■□□□ 1.76
Nucks1Q80XU3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Nucks1Q80XU3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Nucks1Q80XU3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Nucks1Q80XU3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nucks1Q80XU3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Nucks1Q80XU3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26■■□□□ 1.75
Nucks1Q80XU3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nucks1Q80XU3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Nucks1Q80XU3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Nucks1Q80XU3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms