Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Commd3Q63829 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Commd3Q63829 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Commd3Q63829 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Commd3Q63829 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Commd3Q63829 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Commd3Q63829 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Commd3Q63829 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Commd3Q63829 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
Commd3Q63829 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Commd3Q63829 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Commd3Q63829 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.41■□□□□ 0.86
Commd3Q63829 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Commd3Q63829 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.4■□□□□ 0.86
Commd3Q63829 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Commd3Q63829 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Commd3Q63829 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Commd3Q63829 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Commd3Q63829 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Commd3Q63829 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Commd3Q63829 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Commd3Q63829 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Commd3Q63829 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Commd3Q63829 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Commd3Q63829 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Commd3Q63829 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Commd3Q63829 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Commd3Q63829 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Commd3Q63829 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Commd3Q63829 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Commd3Q63829 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Commd3Q63829 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Commd3Q63829 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Commd3Q63829 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Commd3Q63829 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.34■□□□□ 0.85
Commd3Q63829 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Commd3Q63829 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.33■□□□□ 0.85
Commd3Q63829 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Commd3Q63829 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Commd3Q63829 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Commd3Q63829 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Commd3Q63829 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Commd3Q63829 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Commd3Q63829 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Commd3Q63829 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Commd3Q63829 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Commd3Q63829 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Commd3Q63829 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Commd3Q63829 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Commd3Q63829 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Commd3Q63829 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Commd3Q63829 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Commd3Q63829 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Commd3Q63829 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Commd3Q63829 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Commd3Q63829 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Commd3Q63829 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Commd3Q63829 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Commd3Q63829 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Commd3Q63829 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Commd3Q63829 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Commd3Q63829 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Commd3Q63829 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Commd3Q63829 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Commd3Q63829 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Commd3Q63829 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Commd3Q63829 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Commd3Q63829 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Commd3Q63829 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.2■□□□□ 0.82
Commd3Q63829 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Commd3Q63829 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Commd3Q63829 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Commd3Q63829 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Commd3Q63829 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Commd3Q63829 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Commd3Q63829 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Commd3Q63829 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Commd3Q63829 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Commd3Q63829 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Commd3Q63829 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Commd3Q63829 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Commd3Q63829 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.15■□□□□ 0.82
Commd3Q63829 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Commd3Q63829 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Commd3Q63829 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Commd3Q63829 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Commd3Q63829 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Commd3Q63829 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Commd3Q63829 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Commd3Q63829 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Commd3Q63829 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Commd3Q63829 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Commd3Q63829 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
Commd3Q63829 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Commd3Q63829 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.1■□□□□ 0.81
Commd3Q63829 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Commd3Q63829 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Commd3Q63829 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Commd3Q63829 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Commd3Q63829 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms