Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7d-3Q5R1I1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7d-3Q5R1I1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7d-3Q5R1I1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav7d-3Q5R1I1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7d-3Q5R1I1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.97■□□□□ 0.47
Trav7d-3Q5R1I1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav7d-3Q5R1I1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7d-3Q5R1I1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7d-3Q5R1I1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav7d-3Q5R1I1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7d-3Q5R1I1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav7d-3Q5R1I1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7d-3Q5R1I1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav7d-3Q5R1I1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7d-3Q5R1I1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7d-3Q5R1I1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7d-3Q5R1I1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7d-3Q5R1I1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Trav7d-3Q5R1I1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav7d-3Q5R1I1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7d-3Q5R1I1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7d-3Q5R1I1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7d-3Q5R1I1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7d-3Q5R1I1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav7d-3Q5R1I1 Gm16148-201ENSMUST00000119653 893 ntBASIC17.89■□□□□ 0.45
Trav7d-3Q5R1I1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav7d-3Q5R1I1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7d-3Q5R1I1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7d-3Q5R1I1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7d-3Q5R1I1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav7d-3Q5R1I1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav7d-3Q5R1I1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Trav7d-3Q5R1I1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7d-3Q5R1I1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7d-3Q5R1I1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav7d-3Q5R1I1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7d-3Q5R1I1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7d-3Q5R1I1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7d-3Q5R1I1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7d-3Q5R1I1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7d-3Q5R1I1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trav7d-3Q5R1I1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7d-3Q5R1I1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav7d-3Q5R1I1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7d-3Q5R1I1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7d-3Q5R1I1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7d-3Q5R1I1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7d-3Q5R1I1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7d-3Q5R1I1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7d-3Q5R1I1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7d-3Q5R1I1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7d-3Q5R1I1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7d-3Q5R1I1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav7d-3Q5R1I1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trav7d-3Q5R1I1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7d-3Q5R1I1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7d-3Q5R1I1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7d-3Q5R1I1 Amer2-203ENSMUST00000225247 2662 ntBASIC17.77■□□□□ 0.44
Trav7d-3Q5R1I1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7d-3Q5R1I1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7d-3Q5R1I1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trav7d-3Q5R1I1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.75■□□□□ 0.43
Trav7d-3Q5R1I1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7d-3Q5R1I1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7d-3Q5R1I1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav7d-3Q5R1I1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7d-3Q5R1I1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav7d-3Q5R1I1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7d-3Q5R1I1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7d-3Q5R1I1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7d-3Q5R1I1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7d-3Q5R1I1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav7d-3Q5R1I1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav7d-3Q5R1I1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav7d-3Q5R1I1 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.72■□□□□ 0.43
Trav7d-3Q5R1I1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav7d-3Q5R1I1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trav7d-3Q5R1I1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav7d-3Q5R1I1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7d-3Q5R1I1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav7d-3Q5R1I1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.69■□□□□ 0.42
Trav7d-3Q5R1I1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7d-3Q5R1I1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7d-3Q5R1I1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav7d-3Q5R1I1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav7d-3Q5R1I1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms