Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav3-3Q5R1C3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav3-3Q5R1C3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav3-3Q5R1C3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3-3Q5R1C3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav3-3Q5R1C3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav3-3Q5R1C3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav3-3Q5R1C3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav3-3Q5R1C3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Trav3-3Q5R1C3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav3-3Q5R1C3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav3-3Q5R1C3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3-3Q5R1C3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3-3Q5R1C3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3-3Q5R1C3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav3-3Q5R1C3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav3-3Q5R1C3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav3-3Q5R1C3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav3-3Q5R1C3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav3-3Q5R1C3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3-3Q5R1C3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3-3Q5R1C3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav3-3Q5R1C3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav3-3Q5R1C3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav3-3Q5R1C3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Trav3-3Q5R1C3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.28■□□□□ 0.52
Trav3-3Q5R1C3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav3-3Q5R1C3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.28■□□□□ 0.52
Trav3-3Q5R1C3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav3-3Q5R1C3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav3-3Q5R1C3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav3-3Q5R1C3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Trav3-3Q5R1C3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav3-3Q5R1C3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav3-3Q5R1C3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav3-3Q5R1C3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav3-3Q5R1C3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trav3-3Q5R1C3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Trav3-3Q5R1C3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav3-3Q5R1C3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav3-3Q5R1C3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav3-3Q5R1C3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trav3-3Q5R1C3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3-3Q5R1C3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3-3Q5R1C3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav3-3Q5R1C3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav3-3Q5R1C3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3-3Q5R1C3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav3-3Q5R1C3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3-3Q5R1C3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav3-3Q5R1C3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav3-3Q5R1C3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav3-3Q5R1C3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav3-3Q5R1C3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav3-3Q5R1C3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3-3Q5R1C3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3-3Q5R1C3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav3-3Q5R1C3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav3-3Q5R1C3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav3-3Q5R1C3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav3-3Q5R1C3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav3-3Q5R1C3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav3-3Q5R1C3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav3-3Q5R1C3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trav3-3Q5R1C3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav3-3Q5R1C3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trav3-3Q5R1C3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav3-3Q5R1C3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav3-3Q5R1C3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav3-3Q5R1C3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav3-3Q5R1C3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav3-3Q5R1C3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-3Q5R1C3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-3Q5R1C3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-3Q5R1C3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-3Q5R1C3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav3-3Q5R1C3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav3-3Q5R1C3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav3-3Q5R1C3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
Trav3-3Q5R1C3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav3-3Q5R1C3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav3-3Q5R1C3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav3-3Q5R1C3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav3-3Q5R1C3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms