Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.97■□□□□ 0.79
Znf48Q3US17 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Znf48Q3US17 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Znf48Q3US17 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Znf48Q3US17 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Znf48Q3US17 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Znf48Q3US17 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Znf48Q3US17 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Znf48Q3US17 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Znf48Q3US17 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Znf48Q3US17 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Znf48Q3US17 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Znf48Q3US17 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Znf48Q3US17 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Znf48Q3US17 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Znf48Q3US17 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Znf48Q3US17 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Znf48Q3US17 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Znf48Q3US17 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Znf48Q3US17 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Znf48Q3US17 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Znf48Q3US17 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.86■□□□□ 0.77
Znf48Q3US17 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.86■□□□□ 0.77
Znf48Q3US17 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Znf48Q3US17 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Znf48Q3US17 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Znf48Q3US17 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.84■□□□□ 0.77
Znf48Q3US17 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Znf48Q3US17 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Znf48Q3US17 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Znf48Q3US17 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Znf48Q3US17 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Znf48Q3US17 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Znf48Q3US17 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Znf48Q3US17 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Znf48Q3US17 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Znf48Q3US17 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Znf48Q3US17 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.8■□□□□ 0.76
Znf48Q3US17 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Znf48Q3US17 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.79■□□□□ 0.76
Znf48Q3US17 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Znf48Q3US17 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.78■□□□□ 0.76
Znf48Q3US17 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Znf48Q3US17 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Znf48Q3US17 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Znf48Q3US17 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Znf48Q3US17 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Znf48Q3US17 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Znf48Q3US17 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Znf48Q3US17 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Znf48Q3US17 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Znf48Q3US17 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Znf48Q3US17 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.75■□□□□ 0.75
Znf48Q3US17 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Znf48Q3US17 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Znf48Q3US17 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Znf48Q3US17 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.74■□□□□ 0.75
Znf48Q3US17 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Znf48Q3US17 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Znf48Q3US17 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Znf48Q3US17 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Znf48Q3US17 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Znf48Q3US17 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Znf48Q3US17 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Znf48Q3US17 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Znf48Q3US17 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Znf48Q3US17 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Znf48Q3US17 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Znf48Q3US17 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.68■□□□□ 0.74
Znf48Q3US17 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Znf48Q3US17 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.67■□□□□ 0.74
Znf48Q3US17 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.67■□□□□ 0.74
Znf48Q3US17 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Znf48Q3US17 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Znf48Q3US17 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Znf48Q3US17 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Znf48Q3US17 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.65■□□□□ 0.74
Znf48Q3US17 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Znf48Q3US17 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Znf48Q3US17 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Znf48Q3US17 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Znf48Q3US17 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf48Q3US17 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Znf48Q3US17 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Znf48Q3US17 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Znf48Q3US17 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf48Q3US17 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Znf48Q3US17 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Znf48Q3US17 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Znf48Q3US17 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Znf48Q3US17 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Znf48Q3US17 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Znf48Q3US17 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf48Q3US17 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Znf48Q3US17 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.61■□□□□ 0.73
Znf48Q3US17 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Znf48Q3US17 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Znf48Q3US17 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.6■□□□□ 0.73
Znf48Q3US17 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Znf48Q3US17 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms