Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sec61a1P61620 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sec61a1P61620 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sec61a1P61620 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.43■■□□□ 1.02
Sec61a1P61620 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sec61a1P61620 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Sec61a1P61620 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sec61a1P61620 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sec61a1P61620 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Sec61a1P61620 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sec61a1P61620 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sec61a1P61620 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sec61a1P61620 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sec61a1P61620 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Sec61a1P61620 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sec61a1P61620 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sec61a1P61620 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sec61a1P61620 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sec61a1P61620 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sec61a1P61620 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sec61a1P61620 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sec61a1P61620 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sec61a1P61620 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.34■■□□□ 1.01
Sec61a1P61620 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.33■■□□□ 1.01
Sec61a1P61620 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sec61a1P61620 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Sec61a1P61620 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sec61a1P61620 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.32■■□□□ 1
Sec61a1P61620 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sec61a1P61620 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sec61a1P61620 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sec61a1P61620 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Sec61a1P61620 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sec61a1P61620 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.29■■□□□ 1
Sec61a1P61620 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.28■■□□□ 1
Sec61a1P61620 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sec61a1P61620 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sec61a1P61620 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Sec61a1P61620 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.26■□□□□ 0.99
Sec61a1P61620 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sec61a1P61620 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sec61a1P61620 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sec61a1P61620 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sec61a1P61620 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sec61a1P61620 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sec61a1P61620 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sec61a1P61620 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sec61a1P61620 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sec61a1P61620 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sec61a1P61620 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sec61a1P61620 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.2■□□□□ 0.98
Sec61a1P61620 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sec61a1P61620 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sec61a1P61620 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sec61a1P61620 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sec61a1P61620 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.19■□□□□ 0.98
Sec61a1P61620 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sec61a1P61620 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sec61a1P61620 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sec61a1P61620 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sec61a1P61620 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.17■□□□□ 0.98
Sec61a1P61620 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Sec61a1P61620 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.17■□□□□ 0.98
Sec61a1P61620 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sec61a1P61620 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Sec61a1P61620 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sec61a1P61620 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sec61a1P61620 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sec61a1P61620 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sec61a1P61620 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sec61a1P61620 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sec61a1P61620 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sec61a1P61620 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sec61a1P61620 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sec61a1P61620 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sec61a1P61620 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sec61a1P61620 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sec61a1P61620 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.11■□□□□ 0.97
Sec61a1P61620 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sec61a1P61620 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sec61a1P61620 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sec61a1P61620 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sec61a1P61620 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sec61a1P61620 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sec61a1P61620 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sec61a1P61620 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sec61a1P61620 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sec61a1P61620 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Sec61a1P61620 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.08■□□□□ 0.97
Sec61a1P61620 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sec61a1P61620 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sec61a1P61620 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sec61a1P61620 Gm45855-201ENSMUST00000212546 880 ntBASIC21.07■□□□□ 0.96
Sec61a1P61620 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sec61a1P61620 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec61a1P61620 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.05■□□□□ 0.96
Sec61a1P61620 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec61a1P61620 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sec61a1P61620 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec61a1P61620 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms