Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sssca1P56873 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sssca1P56873 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sssca1P56873 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sssca1P56873 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sssca1P56873 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sssca1P56873 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sssca1P56873 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sssca1P56873 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sssca1P56873 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sssca1P56873 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sssca1P56873 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sssca1P56873 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sssca1P56873 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sssca1P56873 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sssca1P56873 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sssca1P56873 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sssca1P56873 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sssca1P56873 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sssca1P56873 Peli2-204ENSMUST00000226513 1320 ntBASIC19.77■□□□□ 0.76
Sssca1P56873 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sssca1P56873 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sssca1P56873 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sssca1P56873 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sssca1P56873 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.75■□□□□ 0.75
Sssca1P56873 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sssca1P56873 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sssca1P56873 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sssca1P56873 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sssca1P56873 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sssca1P56873 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sssca1P56873 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sssca1P56873 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sssca1P56873 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sssca1P56873 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sssca1P56873 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.69■□□□□ 0.74
Sssca1P56873 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sssca1P56873 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sssca1P56873 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.69■□□□□ 0.74
Sssca1P56873 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sssca1P56873 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.68■□□□□ 0.74
Sssca1P56873 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sssca1P56873 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.66■□□□□ 0.74
Sssca1P56873 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sssca1P56873 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sssca1P56873 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sssca1P56873 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sssca1P56873 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sssca1P56873 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sssca1P56873 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Sssca1P56873 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sssca1P56873 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sssca1P56873 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sssca1P56873 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sssca1P56873 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sssca1P56873 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sssca1P56873 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sssca1P56873 Gm26115-201ENSMUST00000175605 87 ntBASIC19.61■□□□□ 0.73
Sssca1P56873 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sssca1P56873 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sssca1P56873 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Sssca1P56873 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sssca1P56873 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sssca1P56873 Gm8109-201ENSMUST00000194076 746 ntBASIC19.59■□□□□ 0.73
Sssca1P56873 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sssca1P56873 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sssca1P56873 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sssca1P56873 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sssca1P56873 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sssca1P56873 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sssca1P56873 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sssca1P56873 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sssca1P56873 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sssca1P56873 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.55■□□□□ 0.72
Sssca1P56873 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sssca1P56873 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sssca1P56873 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sssca1P56873 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sssca1P56873 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sssca1P56873 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sssca1P56873 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sssca1P56873 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sssca1P56873 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.51■□□□□ 0.71
Sssca1P56873 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sssca1P56873 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sssca1P56873 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sssca1P56873 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sssca1P56873 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sssca1P56873 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sssca1P56873 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
Sssca1P56873 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sssca1P56873 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sssca1P56873 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sssca1P56873 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sssca1P56873 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sssca1P56873 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sssca1P56873 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sssca1P56873 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sssca1P56873 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.46■□□□□ 0.71
Sssca1P56873 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms