Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cks2P56390 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cks2P56390 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cks2P56390 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cks2P56390 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cks2P56390 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cks2P56390 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cks2P56390 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cks2P56390 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cks2P56390 Peli2-204ENSMUST00000226513 1320 ntBASIC20.53■□□□□ 0.88
Cks2P56390 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cks2P56390 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cks2P56390 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cks2P56390 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cks2P56390 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cks2P56390 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cks2P56390 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cks2P56390 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
Cks2P56390 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cks2P56390 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cks2P56390 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cks2P56390 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cks2P56390 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.46■□□□□ 0.87
Cks2P56390 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cks2P56390 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cks2P56390 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cks2P56390 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cks2P56390 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cks2P56390 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cks2P56390 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cks2P56390 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.42■□□□□ 0.86
Cks2P56390 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cks2P56390 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.41■□□□□ 0.86
Cks2P56390 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.4■□□□□ 0.86
Cks2P56390 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cks2P56390 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cks2P56390 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cks2P56390 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Cks2P56390 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cks2P56390 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cks2P56390 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cks2P56390 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cks2P56390 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cks2P56390 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cks2P56390 Gm26115-201ENSMUST00000175605 87 ntBASIC20.36■□□□□ 0.85
Cks2P56390 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cks2P56390 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Cks2P56390 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cks2P56390 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cks2P56390 Gm8109-201ENSMUST00000194076 746 ntBASIC20.34■□□□□ 0.85
Cks2P56390 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cks2P56390 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cks2P56390 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cks2P56390 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cks2P56390 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cks2P56390 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cks2P56390 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cks2P56390 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cks2P56390 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cks2P56390 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cks2P56390 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cks2P56390 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cks2P56390 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cks2P56390 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cks2P56390 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cks2P56390 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cks2P56390 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cks2P56390 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.26■□□□□ 0.83
Cks2P56390 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cks2P56390 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cks2P56390 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cks2P56390 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cks2P56390 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cks2P56390 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cks2P56390 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cks2P56390 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cks2P56390 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cks2P56390 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cks2P56390 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cks2P56390 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cks2P56390 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cks2P56390 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cks2P56390 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cks2P56390 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.21■□□□□ 0.83
Cks2P56390 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cks2P56390 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cks2P56390 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cks2P56390 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cks2P56390 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cks2P56390 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
Cks2P56390 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cks2P56390 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cks2P56390 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cks2P56390 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cks2P56390 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cks2P56390 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cks2P56390 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cks2P56390 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cks2P56390 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cks2P56390 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms