Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NeflP08551 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NeflP08551 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.89■■■□□ 2.7
NeflP08551 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NeflP08551 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
NeflP08551 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NeflP08551 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NeflP08551 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NeflP08551 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
NeflP08551 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NeflP08551 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NeflP08551 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
NeflP08551 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NeflP08551 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NeflP08551 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC31.79■■■□□ 2.68
NeflP08551 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
NeflP08551 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NeflP08551 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NeflP08551 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NeflP08551 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
NeflP08551 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
NeflP08551 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
NeflP08551 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
NeflP08551 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
NeflP08551 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NeflP08551 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NeflP08551 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NeflP08551 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
NeflP08551 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
NeflP08551 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NeflP08551 Peli2-204ENSMUST00000226513 1320 ntBASIC31.73■■■□□ 2.67
NeflP08551 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NeflP08551 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NeflP08551 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.72■■■□□ 2.67
NeflP08551 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NeflP08551 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NeflP08551 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NeflP08551 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NeflP08551 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
NeflP08551 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NeflP08551 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NeflP08551 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NeflP08551 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
NeflP08551 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
NeflP08551 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NeflP08551 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NeflP08551 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
NeflP08551 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.61■■■□□ 2.65
NeflP08551 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NeflP08551 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NeflP08551 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.59■■■□□ 2.65
NeflP08551 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.57■■■□□ 2.65
NeflP08551 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
NeflP08551 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NeflP08551 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NeflP08551 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NeflP08551 Gm26115-201ENSMUST00000175605 87 ntBASIC31.53■■■□□ 2.64
NeflP08551 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NeflP08551 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
NeflP08551 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.53■■■□□ 2.64
NeflP08551 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NeflP08551 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NeflP08551 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
NeflP08551 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
NeflP08551 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC31.51■■■□□ 2.63
NeflP08551 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
NeflP08551 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
NeflP08551 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NeflP08551 Gm8109-201ENSMUST00000194076 746 ntBASIC31.5■■■□□ 2.63
NeflP08551 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
NeflP08551 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
NeflP08551 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
NeflP08551 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NeflP08551 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
NeflP08551 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
NeflP08551 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NeflP08551 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
NeflP08551 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NeflP08551 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NeflP08551 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NeflP08551 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NeflP08551 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NeflP08551 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NeflP08551 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NeflP08551 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NeflP08551 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
NeflP08551 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NeflP08551 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC31.36■■■□□ 2.61
NeflP08551 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NeflP08551 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NeflP08551 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NeflP08551 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NeflP08551 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NeflP08551 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NeflP08551 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NeflP08551 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
NeflP08551 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NeflP08551 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NeflP08551 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
NeflP08551 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.27■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms