Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdh1F7BJK1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh1F7BJK1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh1F7BJK1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh1F7BJK1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh1F7BJK1 Gm8109-201ENSMUST00000194076 746 ntBASIC22.3■■□□□ 1.16
Pcdh1F7BJK1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdh1F7BJK1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh1F7BJK1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh1F7BJK1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh1F7BJK1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh1F7BJK1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh1F7BJK1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdh1F7BJK1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdh1F7BJK1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh1F7BJK1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh1F7BJK1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pcdh1F7BJK1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.22■■□□□ 1.15
Pcdh1F7BJK1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh1F7BJK1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.22■■□□□ 1.15
Pcdh1F7BJK1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh1F7BJK1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh1F7BJK1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh1F7BJK1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh1F7BJK1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh1F7BJK1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh1F7BJK1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh1F7BJK1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh1F7BJK1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 Peli2-204ENSMUST00000226513 1320 ntBASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh1F7BJK1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh1F7BJK1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh1F7BJK1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh1F7BJK1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh1F7BJK1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh1F7BJK1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh1F7BJK1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.14■■□□□ 1.13
Pcdh1F7BJK1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh1F7BJK1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh1F7BJK1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh1F7BJK1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Pcdh1F7BJK1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh1F7BJK1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh1F7BJK1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Pcdh1F7BJK1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh1F7BJK1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh1F7BJK1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh1F7BJK1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh1F7BJK1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdh1F7BJK1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.08■■□□□ 1.13
Pcdh1F7BJK1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdh1F7BJK1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.07■■□□□ 1.12
Pcdh1F7BJK1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh1F7BJK1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh1F7BJK1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Pcdh1F7BJK1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh1F7BJK1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh1F7BJK1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh1F7BJK1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Pcdh1F7BJK1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdh1F7BJK1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pcdh1F7BJK1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdh1F7BJK1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdh1F7BJK1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Pcdh1F7BJK1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdh1F7BJK1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh1F7BJK1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh1F7BJK1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdh1F7BJK1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh1F7BJK1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdh1F7BJK1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh1F7BJK1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh1F7BJK1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdh1F7BJK1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh1F7BJK1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh1F7BJK1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh1F7BJK1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh1F7BJK1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Pcdh1F7BJK1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh1F7BJK1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh1F7BJK1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh1F7BJK1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh1F7BJK1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh1F7BJK1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pcdh1F7BJK1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pcdh1F7BJK1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pcdh1F7BJK1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh1F7BJK1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh1F7BJK1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh1F7BJK1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh1F7BJK1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdh1F7BJK1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh1F7BJK1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdh1F7BJK1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh1F7BJK1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh1F7BJK1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms