Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv29A0A0G2LB96 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv29A0A0G2LB96 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv29A0A0G2LB96 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trbv29A0A0G2LB96 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.53■□□□□ 0.88
Trbv29A0A0G2LB96 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv29A0A0G2LB96 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv29A0A0G2LB96 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv29A0A0G2LB96 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trbv29A0A0G2LB96 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.51■□□□□ 0.87
Trbv29A0A0G2LB96 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.5■□□□□ 0.87
Trbv29A0A0G2LB96 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trbv29A0A0G2LB96 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv29A0A0G2LB96 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.47■□□□□ 0.87
Trbv29A0A0G2LB96 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv29A0A0G2LB96 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv29A0A0G2LB96 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv29A0A0G2LB96 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv29A0A0G2LB96 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trbv29A0A0G2LB96 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv29A0A0G2LB96 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.45■□□□□ 0.86
Trbv29A0A0G2LB96 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv29A0A0G2LB96 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv29A0A0G2LB96 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv29A0A0G2LB96 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv29A0A0G2LB96 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Trbv29A0A0G2LB96 Gm26115-201ENSMUST00000175605 87 ntBASIC20.41■□□□□ 0.86
Trbv29A0A0G2LB96 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trbv29A0A0G2LB96 Gm8109-201ENSMUST00000194076 746 ntBASIC20.4■□□□□ 0.86
Trbv29A0A0G2LB96 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv29A0A0G2LB96 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trbv29A0A0G2LB96 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv29A0A0G2LB96 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trbv29A0A0G2LB96 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv29A0A0G2LB96 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv29A0A0G2LB96 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv29A0A0G2LB96 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trbv29A0A0G2LB96 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv29A0A0G2LB96 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trbv29A0A0G2LB96 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.35■□□□□ 0.85
Trbv29A0A0G2LB96 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv29A0A0G2LB96 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv29A0A0G2LB96 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv29A0A0G2LB96 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv29A0A0G2LB96 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv29A0A0G2LB96 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv29A0A0G2LB96 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv29A0A0G2LB96 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv29A0A0G2LB96 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv29A0A0G2LB96 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv29A0A0G2LB96 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv29A0A0G2LB96 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv29A0A0G2LB96 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv29A0A0G2LB96 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv29A0A0G2LB96 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv29A0A0G2LB96 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv29A0A0G2LB96 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv29A0A0G2LB96 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv29A0A0G2LB96 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trbv29A0A0G2LB96 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv29A0A0G2LB96 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv29A0A0G2LB96 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.25■□□□□ 0.83
Trbv29A0A0G2LB96 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbv29A0A0G2LB96 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbv29A0A0G2LB96 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv29A0A0G2LB96 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv29A0A0G2LB96 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trbv29A0A0G2LB96 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
Trbv29A0A0G2LB96 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv29A0A0G2LB96 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv29A0A0G2LB96 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trbv29A0A0G2LB96 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv29A0A0G2LB96 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trbv29A0A0G2LB96 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv29A0A0G2LB96 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv29A0A0G2LB96 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv29A0A0G2LB96 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv29A0A0G2LB96 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trbv29A0A0G2LB96 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv29A0A0G2LB96 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.2■□□□□ 0.82
Trbv29A0A0G2LB96 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv29A0A0G2LB96 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv29A0A0G2LB96 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trbv29A0A0G2LB96 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv29A0A0G2LB96 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv29A0A0G2LB96 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv29A0A0G2LB96 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv29A0A0G2LB96 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv29A0A0G2LB96 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Trbv29A0A0G2LB96 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv29A0A0G2LB96 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv29A0A0G2LB96 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trbv29A0A0G2LB96 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv29A0A0G2LB96 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms