Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Amer2-203ENSMUST00000225247 2662 ntBASIC18.91■□□□□ 0.62
Trav21-dv12A0A075B6C4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav21-dv12A0A075B6C4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav21-dv12A0A075B6C4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav21-dv12A0A075B6C4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav21-dv12A0A075B6C4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Trav21-dv12A0A075B6C4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav21-dv12A0A075B6C4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav21-dv12A0A075B6C4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav21-dv12A0A075B6C4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav21-dv12A0A075B6C4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav21-dv12A0A075B6C4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.84■□□□□ 0.61
Trav21-dv12A0A075B6C4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav21-dv12A0A075B6C4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav21-dv12A0A075B6C4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav21-dv12A0A075B6C4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav21-dv12A0A075B6C4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav21-dv12A0A075B6C4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav21-dv12A0A075B6C4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav21-dv12A0A075B6C4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav21-dv12A0A075B6C4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav21-dv12A0A075B6C4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav21-dv12A0A075B6C4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav21-dv12A0A075B6C4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav21-dv12A0A075B6C4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav21-dv12A0A075B6C4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav21-dv12A0A075B6C4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav21-dv12A0A075B6C4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav21-dv12A0A075B6C4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trav21-dv12A0A075B6C4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav21-dv12A0A075B6C4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav21-dv12A0A075B6C4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav21-dv12A0A075B6C4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav21-dv12A0A075B6C4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav21-dv12A0A075B6C4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav21-dv12A0A075B6C4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav21-dv12A0A075B6C4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trav21-dv12A0A075B6C4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav21-dv12A0A075B6C4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav21-dv12A0A075B6C4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav21-dv12A0A075B6C4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav21-dv12A0A075B6C4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav21-dv12A0A075B6C4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav21-dv12A0A075B6C4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav21-dv12A0A075B6C4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav21-dv12A0A075B6C4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav21-dv12A0A075B6C4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav21-dv12A0A075B6C4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.72■□□□□ 0.59
Trav21-dv12A0A075B6C4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Trav21-dv12A0A075B6C4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.72■□□□□ 0.59
Trav21-dv12A0A075B6C4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trav21-dv12A0A075B6C4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trav21-dv12A0A075B6C4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav21-dv12A0A075B6C4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.71■□□□□ 0.59
Trav21-dv12A0A075B6C4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav21-dv12A0A075B6C4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav21-dv12A0A075B6C4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav21-dv12A0A075B6C4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav21-dv12A0A075B6C4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav21-dv12A0A075B6C4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav21-dv12A0A075B6C4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav21-dv12A0A075B6C4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav21-dv12A0A075B6C4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Trav21-dv12A0A075B6C4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav21-dv12A0A075B6C4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav21-dv12A0A075B6C4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav21-dv12A0A075B6C4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav21-dv12A0A075B6C4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav21-dv12A0A075B6C4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trav21-dv12A0A075B6C4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav21-dv12A0A075B6C4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav21-dv12A0A075B6C4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav21-dv12A0A075B6C4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav21-dv12A0A075B6C4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav21-dv12A0A075B6C4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.62■□□□□ 0.57
Trav21-dv12A0A075B6C4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav21-dv12A0A075B6C4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav21-dv12A0A075B6C4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav21-dv12A0A075B6C4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav21-dv12A0A075B6C4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav21-dv12A0A075B6C4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.61■□□□□ 0.57
Trav21-dv12A0A075B6C4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav21-dv12A0A075B6C4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav21-dv12A0A075B6C4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav21-dv12A0A075B6C4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav21-dv12A0A075B6C4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav21-dv12A0A075B6C4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav21-dv12A0A075B6C4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.58■□□□□ 0.57
Trav21-dv12A0A075B6C4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav21-dv12A0A075B6C4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav21-dv12A0A075B6C4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav21-dv12A0A075B6C4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav21-dv12A0A075B6C4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav21-dv12A0A075B6C4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms