Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12d-3A0A075B6A4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav12d-3A0A075B6A4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12d-3A0A075B6A4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav12d-3A0A075B6A4 Mipep-204ENSMUST00000225043 1548 ntBASIC18.53■□□□□ 0.56
Trav12d-3A0A075B6A4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav12d-3A0A075B6A4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-3A0A075B6A4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-3A0A075B6A4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-3A0A075B6A4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav12d-3A0A075B6A4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Trav12d-3A0A075B6A4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Trav12d-3A0A075B6A4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav12d-3A0A075B6A4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav12d-3A0A075B6A4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12d-3A0A075B6A4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav12d-3A0A075B6A4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-3A0A075B6A4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-3A0A075B6A4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav12d-3A0A075B6A4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trav12d-3A0A075B6A4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-3A0A075B6A4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav12d-3A0A075B6A4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12d-3A0A075B6A4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12d-3A0A075B6A4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav12d-3A0A075B6A4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trav12d-3A0A075B6A4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav12d-3A0A075B6A4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav12d-3A0A075B6A4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12d-3A0A075B6A4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav12d-3A0A075B6A4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav12d-3A0A075B6A4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12d-3A0A075B6A4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav12d-3A0A075B6A4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-3A0A075B6A4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-3A0A075B6A4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-3A0A075B6A4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-3A0A075B6A4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav12d-3A0A075B6A4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav12d-3A0A075B6A4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.38■□□□□ 0.53
Trav12d-3A0A075B6A4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12d-3A0A075B6A4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12d-3A0A075B6A4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav12d-3A0A075B6A4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav12d-3A0A075B6A4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12d-3A0A075B6A4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav12d-3A0A075B6A4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav12d-3A0A075B6A4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12d-3A0A075B6A4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav12d-3A0A075B6A4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-3A0A075B6A4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav12d-3A0A075B6A4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-3A0A075B6A4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav12d-3A0A075B6A4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav12d-3A0A075B6A4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav12d-3A0A075B6A4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav12d-3A0A075B6A4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav12d-3A0A075B6A4 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.31■□□□□ 0.52
Trav12d-3A0A075B6A4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav12d-3A0A075B6A4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav12d-3A0A075B6A4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-3A0A075B6A4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav12d-3A0A075B6A4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-3A0A075B6A4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-3A0A075B6A4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-3A0A075B6A4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-3A0A075B6A4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav12d-3A0A075B6A4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav12d-3A0A075B6A4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-3A0A075B6A4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-3A0A075B6A4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-3A0A075B6A4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-3A0A075B6A4 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.24■□□□□ 0.51
Trav12d-3A0A075B6A4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav12d-3A0A075B6A4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12d-3A0A075B6A4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12d-3A0A075B6A4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.22■□□□□ 0.51
Trav12d-3A0A075B6A4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav12d-3A0A075B6A4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12d-3A0A075B6A4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav12d-3A0A075B6A4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms