Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv1A0A075B657 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdv1A0A075B657 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trdv1A0A075B657 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdv1A0A075B657 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.74■□□□□ 0.59
Trdv1A0A075B657 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdv1A0A075B657 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trdv1A0A075B657 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdv1A0A075B657 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trdv1A0A075B657 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trdv1A0A075B657 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trdv1A0A075B657 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdv1A0A075B657 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdv1A0A075B657 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trdv1A0A075B657 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdv1A0A075B657 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdv1A0A075B657 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Trdv1A0A075B657 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.7■□□□□ 0.58
Trdv1A0A075B657 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trdv1A0A075B657 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trdv1A0A075B657 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.69■□□□□ 0.58
Trdv1A0A075B657 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trdv1A0A075B657 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trdv1A0A075B657 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trdv1A0A075B657 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.68■□□□□ 0.58
Trdv1A0A075B657 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trdv1A0A075B657 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trdv1A0A075B657 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trdv1A0A075B657 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trdv1A0A075B657 Peli2-204ENSMUST00000226513 1320 ntBASIC18.65■□□□□ 0.58
Trdv1A0A075B657 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trdv1A0A075B657 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv1A0A075B657 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv1A0A075B657 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.64■□□□□ 0.57
Trdv1A0A075B657 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv1A0A075B657 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Trdv1A0A075B657 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trdv1A0A075B657 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.63■□□□□ 0.57
Trdv1A0A075B657 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trdv1A0A075B657 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trdv1A0A075B657 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trdv1A0A075B657 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdv1A0A075B657 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv1A0A075B657 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv1A0A075B657 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv1A0A075B657 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trdv1A0A075B657 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trdv1A0A075B657 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.57■□□□□ 0.56
Trdv1A0A075B657 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdv1A0A075B657 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trdv1A0A075B657 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdv1A0A075B657 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trdv1A0A075B657 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdv1A0A075B657 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdv1A0A075B657 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdv1A0A075B657 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Trdv1A0A075B657 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv1A0A075B657 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv1A0A075B657 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv1A0A075B657 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv1A0A075B657 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trdv1A0A075B657 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv1A0A075B657 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv1A0A075B657 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trdv1A0A075B657 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv1A0A075B657 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv1A0A075B657 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv1A0A075B657 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv1A0A075B657 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdv1A0A075B657 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Trdv1A0A075B657 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdv1A0A075B657 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv1A0A075B657 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv1A0A075B657 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trdv1A0A075B657 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.46■□□□□ 0.55
Trdv1A0A075B657 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trdv1A0A075B657 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv1A0A075B657 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv1A0A075B657 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv1A0A075B657 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv1A0A075B657 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv1A0A075B657 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv1A0A075B657 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdv1A0A075B657 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.42■□□□□ 0.54
Trdv1A0A075B657 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdv1A0A075B657 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trdv1A0A075B657 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdv1A0A075B657 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trdv1A0A075B657 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms