Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav9n-4A0A075B631 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav9n-4A0A075B631 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9n-4A0A075B631 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav9n-4A0A075B631 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav9n-4A0A075B631 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trav9n-4A0A075B631 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav9n-4A0A075B631 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav9n-4A0A075B631 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-4A0A075B631 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-4A0A075B631 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav9n-4A0A075B631 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav9n-4A0A075B631 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav9n-4A0A075B631 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav9n-4A0A075B631 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-4A0A075B631 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav9n-4A0A075B631 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav9n-4A0A075B631 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trav9n-4A0A075B631 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav9n-4A0A075B631 Gm24804-201ENSMUST00000174982 85 ntBASIC16.71■□□□□ 0.27
Trav9n-4A0A075B631 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav9n-4A0A075B631 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav9n-4A0A075B631 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9n-4A0A075B631 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav9n-4A0A075B631 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav9n-4A0A075B631 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-4A0A075B631 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav9n-4A0A075B631 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav9n-4A0A075B631 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.66■□□□□ 0.26
Trav9n-4A0A075B631 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav9n-4A0A075B631 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-4A0A075B631 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav9n-4A0A075B631 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav9n-4A0A075B631 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9n-4A0A075B631 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav9n-4A0A075B631 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-4A0A075B631 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-4A0A075B631 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav9n-4A0A075B631 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav9n-4A0A075B631 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav9n-4A0A075B631 Gm16148-201ENSMUST00000119653 893 ntBASIC16.62■□□□□ 0.25
Trav9n-4A0A075B631 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav9n-4A0A075B631 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav9n-4A0A075B631 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-4A0A075B631 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav9n-4A0A075B631 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav9n-4A0A075B631 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.58■□□□□ 0.25
Trav9n-4A0A075B631 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.58■□□□□ 0.25
Trav9n-4A0A075B631 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.58■□□□□ 0.25
Trav9n-4A0A075B631 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav9n-4A0A075B631 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav9n-4A0A075B631 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-4A0A075B631 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-4A0A075B631 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav9n-4A0A075B631 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav9n-4A0A075B631 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-4A0A075B631 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav9n-4A0A075B631 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav9n-4A0A075B631 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-4A0A075B631 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-4A0A075B631 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav9n-4A0A075B631 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav9n-4A0A075B631 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav9n-4A0A075B631 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav9n-4A0A075B631 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.52■□□□□ 0.23
Trav9n-4A0A075B631 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9n-4A0A075B631 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav9n-4A0A075B631 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav9n-4A0A075B631 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-4A0A075B631 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-4A0A075B631 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9n-4A0A075B631 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.5■□□□□ 0.23
Trav9n-4A0A075B631 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-4A0A075B631 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-4A0A075B631 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-4A0A075B631 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9n-4A0A075B631 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9n-4A0A075B631 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms