Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav7n-4A0A075B620 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7n-4A0A075B620 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7n-4A0A075B620 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav7n-4A0A075B620 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trav7n-4A0A075B620 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Trav7n-4A0A075B620 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-4A0A075B620 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trav7n-4A0A075B620 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-4A0A075B620 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav7n-4A0A075B620 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7n-4A0A075B620 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7n-4A0A075B620 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7n-4A0A075B620 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7n-4A0A075B620 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7n-4A0A075B620 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7n-4A0A075B620 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Trav7n-4A0A075B620 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7n-4A0A075B620 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Trav7n-4A0A075B620 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7n-4A0A075B620 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7n-4A0A075B620 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7n-4A0A075B620 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav7n-4A0A075B620 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Trav7n-4A0A075B620 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7n-4A0A075B620 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav7n-4A0A075B620 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-4A0A075B620 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7n-4A0A075B620 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.54■□□□□ 0.56
Trav7n-4A0A075B620 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trav7n-4A0A075B620 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7n-4A0A075B620 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7n-4A0A075B620 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav7n-4A0A075B620 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trav7n-4A0A075B620 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.52■□□□□ 0.55
Trav7n-4A0A075B620 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7n-4A0A075B620 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7n-4A0A075B620 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-4A0A075B620 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.49■□□□□ 0.55
Trav7n-4A0A075B620 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-4A0A075B620 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trav7n-4A0A075B620 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7n-4A0A075B620 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7n-4A0A075B620 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-4A0A075B620 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.47■□□□□ 0.55
Trav7n-4A0A075B620 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-4A0A075B620 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav7n-4A0A075B620 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7n-4A0A075B620 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav7n-4A0A075B620 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav7n-4A0A075B620 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7n-4A0A075B620 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav7n-4A0A075B620 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7n-4A0A075B620 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav7n-4A0A075B620 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7n-4A0A075B620 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7n-4A0A075B620 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7n-4A0A075B620 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7n-4A0A075B620 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.43■□□□□ 0.54
Trav7n-4A0A075B620 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
Trav7n-4A0A075B620 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-4A0A075B620 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-4A0A075B620 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-4A0A075B620 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-4A0A075B620 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7n-4A0A075B620 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-4A0A075B620 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Trav7n-4A0A075B620 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7n-4A0A075B620 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7n-4A0A075B620 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7n-4A0A075B620 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7n-4A0A075B620 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav7n-4A0A075B620 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trav7n-4A0A075B620 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7n-4A0A075B620 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7n-4A0A075B620 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.37■□□□□ 0.53
Trav7n-4A0A075B620 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav7n-4A0A075B620 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-4A0A075B620 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-4A0A075B620 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7n-4A0A075B620 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7n-4A0A075B620 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trav7n-4A0A075B620 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav7n-4A0A075B620 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7n-4A0A075B620 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms