Protein–RNA interactions for Protein: A0A075B607

Trav14-3, T cell receptor alpha variable 14-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-3A0A075B607 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav14-3A0A075B607 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav14-3A0A075B607 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav14-3A0A075B607 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14-3A0A075B607 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trav14-3A0A075B607 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14-3A0A075B607 Rab21-202ENSMUST00000218831 843 ntBASIC18.27■□□□□ 0.52
Trav14-3A0A075B607 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav14-3A0A075B607 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14-3A0A075B607 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav14-3A0A075B607 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Trav14-3A0A075B607 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14-3A0A075B607 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14-3A0A075B607 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav14-3A0A075B607 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14-3A0A075B607 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14-3A0A075B607 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav14-3A0A075B607 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav14-3A0A075B607 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav14-3A0A075B607 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.2■□□□□ 0.5
Trav14-3A0A075B607 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.19■□□□□ 0.5
Trav14-3A0A075B607 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav14-3A0A075B607 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14-3A0A075B607 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14-3A0A075B607 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14-3A0A075B607 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav14-3A0A075B607 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Trav14-3A0A075B607 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14-3A0A075B607 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14-3A0A075B607 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14-3A0A075B607 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trav14-3A0A075B607 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14-3A0A075B607 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav14-3A0A075B607 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav14-3A0A075B607 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav14-3A0A075B607 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trav14-3A0A075B607 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14-3A0A075B607 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14-3A0A075B607 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav14-3A0A075B607 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav14-3A0A075B607 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.12■□□□□ 0.49
Trav14-3A0A075B607 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav14-3A0A075B607 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14-3A0A075B607 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14-3A0A075B607 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14-3A0A075B607 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14-3A0A075B607 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trav14-3A0A075B607 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14-3A0A075B607 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav14-3A0A075B607 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav14-3A0A075B607 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.08■□□□□ 0.48
Trav14-3A0A075B607 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Trav14-3A0A075B607 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav14-3A0A075B607 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav14-3A0A075B607 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav14-3A0A075B607 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav14-3A0A075B607 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14-3A0A075B607 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14-3A0A075B607 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14-3A0A075B607 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14-3A0A075B607 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Trav14-3A0A075B607 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14-3A0A075B607 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14-3A0A075B607 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14-3A0A075B607 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14-3A0A075B607 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14-3A0A075B607 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav14-3A0A075B607 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav14-3A0A075B607 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav14-3A0A075B607 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav14-3A0A075B607 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14-3A0A075B607 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14-3A0A075B607 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trav14-3A0A075B607 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14-3A0A075B607 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav14-3A0A075B607 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav14-3A0A075B607 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav14-3A0A075B607 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav14-3A0A075B607 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav14-3A0A075B607 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms