Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph3bQ9DA80 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.19■□□□□ 0.82
Rsph3bQ9DA80 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph3bQ9DA80 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Gm10252-201ENSMUST00000209541 832 ntBASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph3bQ9DA80 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Gm2399-201ENSMUST00000104944 225 ntBASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph3bQ9DA80 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Gm5643-201ENSMUST00000117081 966 ntBASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rsph3bQ9DA80 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Gm11249-201ENSMUST00000117071 859 ntBASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rsph3bQ9DA80 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rsph3bQ9DA80 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms