Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc96Q9CR92 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc96Q9CR92 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Ccdc96Q9CR92 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Ccdc96Q9CR92 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Gm4968-201ENSMUST00000071458 858 ntBASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Grk6-206ENSMUST00000224995 2971 ntBASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc96Q9CR92 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc96Q9CR92 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Gm20760-201ENSMUST00000179197 648 ntBASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc96Q9CR92 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Golph3-205ENSMUST00000228671 2842 ntBASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc96Q9CR92 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccdc96Q9CR92 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc96Q9CR92 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms