Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scube3Q66PY1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Scube3Q66PY1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.39■□□□□ 0.69
Scube3Q66PY1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.39■□□□□ 0.69
Scube3Q66PY1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.39■□□□□ 0.69
Scube3Q66PY1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.39■□□□□ 0.69
Scube3Q66PY1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scube3Q66PY1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Scube3Q66PY1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scube3Q66PY1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.36■□□□□ 0.69
Scube3Q66PY1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.36■□□□□ 0.69
Scube3Q66PY1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Scube3Q66PY1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.35■□□□□ 0.69
Scube3Q66PY1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scube3Q66PY1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.34■□□□□ 0.69
Scube3Q66PY1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.34■□□□□ 0.69
Scube3Q66PY1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scube3Q66PY1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Scube3Q66PY1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scube3Q66PY1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scube3Q66PY1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scube3Q66PY1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scube3Q66PY1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Scube3Q66PY1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube3Q66PY1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.33■□□□□ 0.68
Scube3Q66PY1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube3Q66PY1 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.33■□□□□ 0.68
Scube3Q66PY1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.33■□□□□ 0.68
Scube3Q66PY1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube3Q66PY1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scube3Q66PY1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Scube3Q66PY1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.32■□□□□ 0.68
Scube3Q66PY1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scube3Q66PY1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scube3Q66PY1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms