Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dio3-201ENSMUST00000097228 1449 ntBASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Shroom1Q5SX79 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Gm44549-201ENSMUST00000208351 577 ntBASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shroom1Q5SX79 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shroom1Q5SX79 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Gm5643-201ENSMUST00000117081 966 ntBASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Shroom1Q5SX79 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shroom1Q5SX79 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom1Q5SX79 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom1Q5SX79 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom1Q5SX79 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom1Q5SX79 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shroom1Q5SX79 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shroom1Q5SX79 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Shroom1Q5SX79 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shroom1Q5SX79 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.55■□□□□ 0.72
Shroom1Q5SX79 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms