Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx6-3Q3UHX8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nkx6-3Q3UHX8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Gm10653-202ENSMUST00000139570 835 ntBASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx6-3Q3UHX8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx6-3Q3UHX8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nkx6-3Q3UHX8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx6-3Q3UHX8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx6-3Q3UHX8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx6-3Q3UHX8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Gm12896-201ENSMUST00000118430 226 ntBASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.42■□□□□ 0.38
Nkx6-3Q3UHX8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms