Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp2O88623 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.84■□□□□ 0.61
Usp2O88623 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.84■□□□□ 0.61
Usp2O88623 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp2O88623 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Usp2O88623 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Usp2O88623 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp2O88623 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp2O88623 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp2O88623 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp2O88623 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp2O88623 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp2O88623 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.83■□□□□ 0.6
Usp2O88623 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Usp2O88623 Gm2559-201ENSMUST00000201323 363 ntBASIC18.83■□□□□ 0.6
Usp2O88623 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp2O88623 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp2O88623 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp2O88623 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp2O88623 Dio3-201ENSMUST00000097228 1449 ntBASIC18.82■□□□□ 0.6
Usp2O88623 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp2O88623 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 BC021767-201ENSMUST00000126387 1716 ntBASIC18.81■□□□□ 0.6
Usp2O88623 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp2O88623 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp2O88623 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp2O88623 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp2O88623 Gm13168-201ENSMUST00000121771 632 ntBASIC18.8■□□□□ 0.6
Usp2O88623 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp2O88623 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp2O88623 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp2O88623 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp2O88623 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp2O88623 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp2O88623 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp2O88623 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp2O88623 Gm2399-201ENSMUST00000104944 225 ntBASIC18.79■□□□□ 0.6
Usp2O88623 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp2O88623 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp2O88623 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.78■□□□□ 0.6
Usp2O88623 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.78■□□□□ 0.6
Usp2O88623 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp2O88623 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Gm11249-201ENSMUST00000117071 859 ntBASIC18.78■□□□□ 0.6
Usp2O88623 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.78■□□□□ 0.6
Usp2O88623 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Usp2O88623 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp2O88623 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp2O88623 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Usp2O88623 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.77■□□□□ 0.6
Usp2O88623 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Gm22240-201ENSMUST00000175225 82 ntBASIC18.77■□□□□ 0.6
Usp2O88623 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.77■□□□□ 0.6
Usp2O88623 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Usp2O88623 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp2O88623 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.77■□□□□ 0.59
Usp2O88623 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Usp2O88623 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Usp2O88623 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.76■□□□□ 0.59
Usp2O88623 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp2O88623 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Usp2O88623 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp2O88623 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp2O88623 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp2O88623 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms